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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2795317_2833983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2795317 - 2833983

Intron Length:

38667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATGCAGTAATT

Flanking Amino Acid:

PPGVTGASCQFVSDPCASNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

48.8

-0

2.3

74.1

42.9

Associated Gene:

Gene:

DNER

Ensembl Gene ID:

ENSAPLG00000008889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009259

2795074 - 2907499

112426

ENSAPLT00000018732

2795074 - 2907640

112567