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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2861469_2869266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2861469 - 2869266

Intron Length:

7798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAGAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

KGKCITKPDKATFFCDCEDE

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

71.4

0.53

39.8

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

DNER

Ensembl Gene ID:

ENSAPLG00000008889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018732

2795074 - 2907640

112567

ENSAPLT00000009259

2795074 - 2907499

112426