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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2873029_2881272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2873029 - 2881272

Intron Length:

8244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

ACTATCAAAACC

Flanking Amino Acid:

IHGFTCQCPEGFLGTSCEDK

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

76.3

0.65

67.3

39.3

Major PPT

86.3

0.82

0.7

85.7

28.7

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

46.5

-0.2

1.9

57.85

40.9

Associated Gene:

Gene:

DNER

Ensembl Gene ID:

ENSAPLG00000008889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018732

2795074 - 2907640

112567

ENSAPLT00000009259

2795074 - 2907499

112426