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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2893433_2894544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2893433 - 2894544

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCATTATATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAGAT

U12 Branch Point Sequence:

TTTTTCTCCATT

Flanking Amino Acid:

ATCICAPGYAGEECEIDIND

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.12

0.8

80.2

30.6

Major BPS

71.4

0.53

39.8

Major PPT

60.3

0.23

1.1

65.2

38.9

Minor 5ss

29.2

-2.4

3.8

39.9

46.1

Minor BPS

59.2

0.37

83.48

38.1

Associated Gene:

Gene:

DNER

Ensembl Gene ID:

ENSAPLG00000008889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018732

2795074 - 2907640

112567

ENSAPLT00000009259

2795074 - 2907499

112426