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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2894677_2899529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2894677 - 2899529

Intron Length:

4853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATACCTTTTATT

Flanking Amino Acid:

HGWVGANCEIHLQWKSGHMA

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

87.9

29.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.3

0.59

73.2

36.1

Minor 5ss

47.5

-0.2

2.8

66.5

37.9

Minor BPS

57.1

0.31

1.6

72.49

38.7

Associated Gene:

Gene:

DNER

Ensembl Gene ID:

ENSAPLG00000008889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018732

2795074 - 2907640

112567

ENSAPLT00000009259

2795074 - 2907499

112426