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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2899777_2906351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2899777 - 2906351

Intron Length:

6575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTCT

5'SS Class:

major

3'SS Sequence:

CTTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGTTTGTCACCA

Flanking Amino Acid:

SNAIASIRHARFGKKSRPAM

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

45.3

-0.5

2.4

60.2

44.2

Minor BPS

45.1

-0.3

2.4

63.67

42.8

Associated Gene:

Gene:

DNER

Ensembl Gene ID:

ENSAPLG00000008889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018732

2795074 - 2907640

112567

ENSAPLT00000009259

2795074 - 2907499

112426