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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2922730_2954211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2922730 - 2954211

Intron Length:

31482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGGC

5'SS Class:

major

3'SS Sequence:

TTTCTCTGTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TGCAATATAATT

Flanking Amino Acid:

MWQPATERLQHFQTMLKTKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

64.1

41.8

Major BPS

0.72

78.4

31.2

Major PPT

85.5

0.8

84.7

30.2

Minor 5ss

35.3

-1.7

3.6

49.7

46.9

Minor BPS

46.9

-0.1

1.8

63.31

Associated Gene:

Gene:

PID1

Ensembl Gene ID:

ENSAPLG00000011388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011843

2922700 - 3004019

81320