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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2954359_3003542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2954359 - 3003542

Intron Length:

49184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGCA

5'SS Class:

major

3'SS Sequence:

CTCTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CTTTCCTCTATT

Flanking Amino Acid:

MKTRTHTGCKVTYLGKVSTT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

68.1

37.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

85.1

0.79

0.8

79.9

31.7

Minor 5ss

-2.1

3.3

42.2

44.4

Minor BPS

60.6

0.41

1.9

80.22

41.9

Associated Gene:

Gene:

PID1

Ensembl Gene ID:

ENSAPLG00000011388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011843

2922700 - 3004019

81320