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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3266520_3273847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3266520 - 3273847

Intron Length:

7328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

ACTATTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTATTTTAACT

Flanking Amino Acid:

LGSSVTACKKILCSNSLLES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

69.6

39.8

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

75.7

0.89

1.1

86.62

32.6

Associated Gene:

Gene:

SPHKAP

Ensembl Gene ID:

ENSAPLG00000008536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031726

3244353 - 3315959

71607

ENSAPLT00000027963

3244353 - 3315959

71607

ENSAPLT00000021916

3244353 - 3317227

72875

ENSAPLT00000008875

3244622 - 3317227

72606

ENSAPLT00000036182

3244353 - 3315959

71607