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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3303477_3303765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3303477 - 3303765

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAAGCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTAGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTTTCTTTTAGT

Flanking Amino Acid:

EENEADEYKTGHEKISVSES

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

63.8

34.2

Major BPS

0.6

1.2

75.9

36.3

Major PPT

83.2

0.75

0.8

28.3

Minor 5ss

30.2

-2.3

3.4

36.2

42.7

Minor BPS

66.5

0.6

1.9

87.77

37.8

Associated Gene:

Gene:

SPHKAP

Ensembl Gene ID:

ENSAPLG00000008536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039864

3247564 - 3317227

69664

ENSAPLT00000031726

3244353 - 3315959

71607