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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3311923_3313357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3311923 - 3313357

Intron Length:

1435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTTA

5'SS Class:

major

3'SS Sequence:

TTTGCTTTGTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TAATATTTAAAC

Flanking Amino Acid:

SYLQLSERSLSNGNSSTTSS

Intron Amino Acid Position:

1537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

68.7

38.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

80.4

0.68

80.8

36.8

Minor 5ss

39.3

-1.2

3.5

55.9

48.2

Minor BPS

59.4

0.27

1.6

67.13

37.5

Associated Gene:

Gene:

SPHKAP

Ensembl Gene ID:

ENSAPLG00000008536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036182

3244353 - 3315959

71607

ENSAPLT00000027963

3244353 - 3315959

71607

ENSAPLT00000021916

3244353 - 3317227

72875

ENSAPLT00000040409

3300251 - 3317227

16977

ENSAPLT00000008875

3244622 - 3317227

72606

ENSAPLT00000039864

3247564 - 3317227

69664