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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3313445_3315490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3313445 - 3315490

Intron Length:

2046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTCTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

ATATCACTAACA

Flanking Amino Acid:

QENMSPSPIINELVEEKVFL

Intron Amino Acid Position:

1566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

72.7

0.57

72.1

31.1

Major PPT

71.2

0.48

1.1

75.1

38.8

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

58.1

0.25

1.9

73.39

37.4

Associated Gene:

Gene:

SPHKAP

Ensembl Gene ID:

ENSAPLG00000008536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036182

3244353 - 3315959

71607

ENSAPLT00000027963

3244353 - 3315959

71607

ENSAPLT00000021916

3244353 - 3317227

72875

ENSAPLT00000040409

3300251 - 3317227

16977

ENSAPLT00000008875

3244622 - 3317227

72606

ENSAPLT00000039864

3247564 - 3317227

69664