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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3323558_3327097_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3323558 - 3327097

Intron Length:

3540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAAGTGA

5'SS Class:

major

3'SS Sequence:

ACTACTGAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TACTACTGAAAA

Flanking Amino Acid:

QRIATASADGKVWLCHLCYL

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

58.8

36.5

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

48.3

-0.1

1.2

45.8

39.1

Minor 5ss

31.7

-2.1

3.3

45.6

Minor BPS

52.4

0.07

1.8

64.3

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046014

3323461 - 3343028

19568