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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3327217_3328757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3327217 - 3328757

Intron Length:

1541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTACCTATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

CTTTGTTTACCT

Flanking Amino Acid:

VTGSMDKTCMLWNAMTGAHI

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

53.6

0.09

59.9

32.5

Major PPT

79.4

0.66

0.9

74.1

35.4

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

57.1

0.3

2.1

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046014

3323461 - 3343028

19568

ENSAPLT00000008556

3323884 - 3343039

19156