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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3332816_3335346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3332816 - 3335346

Intron Length:

2531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TTTCTTGCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTTCCCACATTT

Flanking Amino Acid:

YTFRGHTAEIVCLSFNLQST

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

69.6

34.4

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

85.4

0.8

80.2

Minor 5ss

32.5

-2

3.3

47.5

42.3

Minor BPS

48.2

-0

75.09

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046014

3323461 - 3343028

19568

ENSAPLT00000008556

3323884 - 3343039

19156