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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3337432_3338078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3337432 - 3338078

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TATTCAGAAATT

Flanking Amino Acid:

TNVAFNKSGSRFITGSYDRT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.1

37.5

Major BPS

82.3

0.8

83.6

25.8

Major PPT

84.9

0.78

0.8

84.5

30.4

Minor 5ss

42.4

-0.8

2.9

59.1

45.4

Minor BPS

46.9

-0.1

2.4

74.1

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046014

3323461 - 3343028

19568

ENSAPLT00000008556

3323884 - 3343039

19156