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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3374030_3375158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3374030 - 3375158

Intron Length:

1129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

AAATTTTGATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATAAAAA

Flanking Amino Acid:

ASYMLLITIATTYPW*

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

87.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

60.3

0.23

1.1

60.2

44.8

Minor 5ss

40.7

-1

2.8

50.6

39.2

Minor BPS

49.4

-0

64.26

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008415

3368408 - 3376047

7640