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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3374030_3389284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3374030 - 3389284

Intron Length:

15255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATTCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GCTCAGTTAACC

Flanking Amino Acid:

ASYMLLITIATFQIAVNLSM

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

87.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.8

0.78

0.8

81.9

34.4

Minor 5ss

40.7

-1

2.8

50.6

39.2

Minor BPS

48.3

-0.1

2.2

61.69

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026230

3368408 - 3391270

22863