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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3375897_3376784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3375897 - 3376784

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCATCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTTTCTCCCATG

Flanking Amino Acid:

RGLGLNIVTQFLIYGSYFTV

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

73.3

0.53

0.9

63.4

42.5

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

44.7

-0.5

2.2

59.92

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008443

3368408 - 3377183

8776