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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3383728_3384764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3383728 - 3384764

Intron Length:

1037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TAGTTCATAAAA

Flanking Amino Acid:

GPDKNLTIEQHVKQFKSNCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

79.8

0.67

0.9

77.2

37.1

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

55.6

0.17

1.7

66.66

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043606

3382975 - 3385615

2641