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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3394311_3394663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3394311 - 3394663

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTTTTTCATT

Flanking Amino Acid:

AVGVSSNPFMAGAPTGQFPT

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

100

1.24

0.5

100

Major PPT

0.7

0.8

73.1

36.9

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

61.3

0.44

1.7

78.3

39.3

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000031018

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620

ENSAPLT00000039606

3394251 - 3429870

35620