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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3396336_3399875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3396336 - 3399875

Intron Length:

3540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGAAA

5'SS Class:

major

3'SS Sequence:

TTTTGCCTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TCTTCTATAAAT

Flanking Amino Acid:

PFQTNSRGTTAATFGTASMS

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

34.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

78.3

0.64

0.9

71.2

39.6

Minor 5ss

27.9

-2.5

2.8

31.2

42.5

Minor BPS

64.3

0.53

1.7

82.07

39.2

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000031018

3394251 - 3429870

35620