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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3397794_3399875_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3397794 - 3399875

Intron Length:

2082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGAAA

5'SS Class:

major

3'SS Sequence:

TGGCTTCCATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

ATGATTTGACAT

Flanking Amino Acid:

PFQTNSRGTTGLSGAMHSHI

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

34.7

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

57.5

0.17

1.1

Minor 5ss

27.9

-2.5

2.8

31.2

42.5

Minor BPS

-0.4

1.7

56.55

39.9

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039606

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620