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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3399969_3400264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3399969 - 3400264

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATC

Flanking Amino Acid:

VSSSVPAPFGATPSTNPFVA

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.8

81.6

35.6

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

70.5

0.62

1.1

71.62

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000031018

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620

ENSAPLT00000039606

3394251 - 3429870

35620