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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3400345_3401012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3400345 - 3401012

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTTT

5'SS Class:

major

3'SS Sequence:

GAATTATTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTGTCCTGAATG

Flanking Amino Acid:

NAYTSTSNVSSNAFGTVPVA

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.9

34.2

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

74.7

0.56

70.5

44.2

Minor 5ss

45.1

-0.5

3.1

67.5

43.4

Minor BPS

63.5

0.29

1.6

63.95

44.3

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000031018

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620

ENSAPLT00000039606

3394251 - 3429870

35620