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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3403765_3404390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3403765 - 3404390

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAACTC

5'SS Class:

major

3'SS Sequence:

TCTGGCTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTAACTTTAACC

Flanking Amino Acid:

SQSSFQPQNTAFRTLSSSCS

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

63.2

41.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

70.5

0.46

61.3

44.6

Minor 5ss

34.5

-1.8

3.6

50.3

46.3

Minor BPS

0.83

1.2

80.16

34.2

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039606

3394251 - 3429870

35620

ENSAPLT00000035378

3394251 - 3429870

35620