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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3404511_3409258_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3404511 - 3409258

Intron Length:

4748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGCAATTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TATCCATTAACA

Flanking Amino Acid:

ANFAHFNSHTAQNSANAGFA

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

76.5

0.6

0.9

69.2

40.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

71.4

0.67

1.6

80.05

34.7

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620

ENSAPLT00000039606

3394251 - 3429870

35620