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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3410057_3410600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3410057 - 3410600

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CTTTTTTGAATG

Flanking Amino Acid:

FLQEKYEKKRWYVPPEQAKV

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.6

0.58

0.9

71.5

38.5

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

59.2

0.15

1.5

63.05

39.8

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000031018

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620

ENSAPLT00000039606

3394251 - 3429870

35620