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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3421069_3429295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3421069 - 3429295

Intron Length:

8227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

CTTCTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TACTGACGAAAT

Flanking Amino Acid:

SFVCTSCSGILRGLNPPHRV

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

45.5

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

85.9

0.81

0.6

84.9

22.8

Minor 5ss

31.1

-2.2

2.9

42.2

44.3

Minor BPS

38.5

-0.8

2.2

57.69

44.1

Associated Gene:

Gene:

AGFG1

Ensembl Gene ID:

ENSAPLG00000007855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039606

3394251 - 3429870

35620

ENSAPLT00000035378

3394251 - 3429870

35620

ENSAPLT00000031018

3394251 - 3429870

35620

ENSAPLT00000008174

3394251 - 3429870

35620