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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3447451_3448605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3447451 - 3448605

Intron Length:

1155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTACA

5'SS Class:

major

3'SS Sequence:

GTTTTTTTTCAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTTTCAAG

Flanking Amino Acid:

VLPLYFVGLYCDKKMIAEGP

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

74.5

35.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.2

0.68

79.2

38.4

Minor 5ss

32.5

-2

2.4

33.7

34.6

Minor BPS

54.6

-0

1.9

67.62

40.4

Associated Gene:

Gene:

MRPL44

Ensembl Gene ID:

ENSAPLG00000017027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046315

3447279 - 3450661

3383

ENSAPLT00000026601

3447279 - 3450679

3401