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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3456340_3469329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3456340 - 3469329

Intron Length:

12990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

ACTCCTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTATCTACAAAC

Flanking Amino Acid:

QNGQLARNDSLPVLRGGSAA

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.4

39.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

68.4

0.41

0.9

62.2

Minor 5ss

32.6

-2

2.8

43.2

43.8

Minor BPS

46.3

-0.3

1.9

57.85

40.5

Associated Gene:

Gene:

MFF

Ensembl Gene ID:

ENSAPLG00000003615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026924

3452951 - 3471516

18566