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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3480116_3481618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3480116 - 3481618

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATAAAAA

Flanking Amino Acid:

SLWKGFSFVMYTSAGSEASG

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

72.1

0.5

1.1

64.5

45.9

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

52.5

0.08

69.75

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015403

3479600 - 3502960

23361