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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3481734_3482715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3481734 - 3482715

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

GCACTTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGCACTGAATG

Flanking Amino Acid:

SGRALEPHISRCIVCEGPAM

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

75.5

0.57

0.9

68.3

37.3

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

-0.1

1.7

59.04

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015403

3479600 - 3502960

23361