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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3487406_3497639_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3487406 - 3497639

Intron Length:

10234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTTGTTTAT

5'SS Class:

weak_major

3'SS Sequence:

ACCATCATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTTCTAAAAG

Flanking Amino Acid:

FMPSNIMRDVNSPQIYYLYS

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.2

62.6

38.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

60.2

0.23

1.1

39.6

Minor 5ss

38.6

-1.3

3.1

50.4

40.4

Minor BPS

56.7

0.07

1.9

64.96

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015403

3479600 - 3502960

23361