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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3492379_3497721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3492379 - 3497721

Intron Length:

5343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

ATCCTTTTAAGA

Flanking Amino Acid:

PGGQGATGPPGSKGQKGSPG

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

41.8

Major BPS

75.6

0.64

1.5

34.5

Major PPT

0.72

0.9

73.6

41.8

Minor 5ss

33.2

-1.9

3.4

48.6

47.1

Minor BPS

54.1

0.12

1.6

62.09

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024404

3491024 - 3499420

8397