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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3498087_3502871_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3498087 - 3502871

Intron Length:

4785

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCAAGGAGA

5'SS Class:

major

3'SS Sequence:

GAGAGCCAGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATGGAGA

Flanking Amino Acid:

GYVYPEGPKGELGSPGGRGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

64.8

39.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

47.6

-0.1

1.1

36.4

40.4

Minor 5ss

22.6

-3.2

3.8

37.6

Minor BPS

48.2

-0.1

2.1

65.52

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015403

3479600 - 3502960

23361