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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3504591_3505701_R

Intron Information:

Intron Rank:

141337

Intron Class:

major

Intron Phase:

Intron Coordinates:

3504591 - 3505701

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

GTATTCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AACTAATGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.4

32.4

Major BPS

77.9

0.69

0.8

75.9

Major PPT

75.3

0.57

0.9

66.8

40.3

Minor 5ss

35.9

-1.6

2.7

43.9

43.8

Minor BPS

46.9

-0.1

1.8

63.12

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028850

3503600 - 3509114

5515