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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3507509_3509107_R

Intron Information:

Intron Rank:

141340

Intron Class:

major

Intron Phase:

Intron Coordinates:

3507509 - 3509107

Intron Length:

1599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AATGGTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

82.8

0.74

0.9

76.8

37.3

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

58.7

0.35

1.9

75.1

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047641

3506711 - 3510875

4165

ENSAPLT00000028850

3503600 - 3509114

5515