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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3515735_3517020_R

Intron Information:

Intron Rank:

136964

Intron Class:

major

Intron Phase:

Intron Coordinates:

3515735 - 3517020

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGTA

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

35.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.8

0.72

0.9

86.8

24.5

Minor 5ss

34.5

-1.8

3.5

49.1

47.1

Minor BPS

62.4

0.47

1.6

75.72

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032748

3513390 - 3518785

5396