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Intron Name: Anas_platyrhynchos_platyrhynchos_9_353964_355285_F

Intron Information:

Intron Rank:

144106

Intron Class:

major

Intron Phase:

Intron Coordinates:

353964 - 355285

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TAAACTTAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

0.3

62.3

30.4

Major PPT

80.9

0.7

0.8

75.8

32.8

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

56.6

0.19

1.7

65.19

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024332

353874 - 366354

12481