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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3556713_3557597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3556713 - 3557597

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CACCTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATGT

Flanking Amino Acid:

PGPAGEKGDKGPTGVPGFPG

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.7

0.49

0.9

68.7

36.9

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

61.2

0.43

1.9

82.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040371

3545810 - 3563211

17402