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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3557643_3559279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3557643 - 3559279

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

AACTGTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ATGTCTCTAATA

Flanking Amino Acid:

PGFPGLDGVPGLPGSEGPRG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

75.1

40.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

74.5

0.55

0.9

69.9

40.6

Minor 5ss

43.2

-0.7

3.2

69.3

41.2

Minor BPS

61.1

0.35

1.6

70.15

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040371

3545810 - 3563211

17402