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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3600597_3604686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3600597 - 3604686

Intron Length:

4090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATG

5'SS Class:

strong_major

3'SS Sequence:

TATGTACTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATTTTACCT

Flanking Amino Acid:

VGEQGYTGPQGPPGQTGIPG

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.5

40.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

62.8

0.29

1.1

65.3

40.2

Minor 5ss

35.7

-1.6

3.3

47.7

Minor BPS

65.4

0.56

1.6

83.78

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013112

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013821

3595858 - 3607708

11851