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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3629949_3633212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3629949 - 3633212

Intron Length:

3264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCTTTTAATT

Flanking Amino Acid:

RPRDYYSGYSDYYYRYPEYQ

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

30.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.2

0.81

0.8

80.2

36.9

Minor 5ss

34.7

-1.7

3.3

50.4

Minor BPS

70.4

0.72

1.2

80.3

36.2

Associated Gene:

Gene:

RHBDD1

Ensembl Gene ID:

ENSAPLG00000013107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043056

3629499 - 3644709

15211

ENSAPLT00000013647

3618846 - 3644709

25864