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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3633273_3634637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3633273 - 3634637

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTCTTATAT

Flanking Amino Acid:

PLKKIMKACAGAVTSFTDPD

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

82.1

30.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.9

0.65

0.8

78.5

Minor 5ss

42.8

-0.8

2.7

59.2

45.4

Minor BPS

64.6

0.54

1.7

81.89

39.3

Associated Gene:

Gene:

RHBDD1

Ensembl Gene ID:

ENSAPLG00000013107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043056

3629499 - 3644709

15211

ENSAPLT00000013647

3618846 - 3644709

25864