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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3634727_3641805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3634727 - 3641805

Intron Length:

7079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATTATTATCA

Flanking Amino Acid:

ELVAIHLISPGTSFAGHLAG

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

85.1

0.79

0.7

84.7

29.8

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

58.1

0.25

1.8

73.18

38.4

Associated Gene:

Gene:

RHBDD1

Ensembl Gene ID:

ENSAPLG00000013107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043056

3629499 - 3644709

15211

ENSAPLT00000013647

3618846 - 3644709

25864