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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3641939_3644195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3641939 - 3644195

Intron Length:

2257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTCTTTTGATG

Flanking Amino Acid:

YEMNCAVGFSGVLFALKVLN

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.1

0.77

0.8

79.8

32.1

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

56.2

0.05

1.3

58.52

38.1

Associated Gene:

Gene:

RHBDD1

Ensembl Gene ID:

ENSAPLG00000013107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043056

3629499 - 3644709

15211

ENSAPLT00000013647

3618846 - 3644709

25864