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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3771510_3776795_F

Intron Information:

Intron Rank:

129241

Intron Class:

major

Intron Phase:

Intron Coordinates:

3771510 - 3776795

Intron Length:

5286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

AATTCTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GTGTCCCCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

75.4

0.57

0.8

67.2

39.4

Minor 5ss

25.6

-2.8

30.5

42.8

Minor BPS

54.2

0.21

1.9

74.03

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028433

3770952 - 3777093

6142