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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3776892_3785129_F

Intron Information:

Intron Rank:

129245

Intron Class:

major

Intron Phase:

Intron Coordinates:

3776892 - 3785129

Intron Length:

8238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

ATGTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

GTGACCTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

81.2

32.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

81.9

0.72

0.9

73.6

41.2

Minor 5ss

41.5

-0.9

2.8

41.2

Minor BPS

54.5

0.22

1.8

70.97

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040979

3773399 - 3785215

11817