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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3811370_3811798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3811370 - 3811798

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

TTTCCCTTACCA

Flanking Amino Acid:

KPSLLAQKIEVRIPTPLNTS

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

82.3

0.73

0.8

73.3

37.2

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

0.78

1.6

85.03

34.5

Associated Gene:

Gene:

AP2M1

Ensembl Gene ID:

ENSAPLG00000006667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006946

3810576 - 3825439

14864